Bsoft program

bmissing

Usage: bmissing [options] input.img output.img

Generates binary masks corresponding to reciprocal space regions.
Types of use: 1. Creating a new mask: bmissing -v 7 -create 100,100,50 -wedge 45,-60,65 -origin 50,50,25 mask.mrc 2. Generating a mask from an image: bmissing -v 7 -pyramid 30,-30,70,120,-60,50 -wrap test.map mask.mrc The selected regions have value 1 and the omitted regions 0. The default is a blank mask created of the same size as the input image. Mask creation actions: -create 20,60,30 Create a new mask of this size in place of input image Mask modification actions: -wedge 45,-70,65 Missing wedge mask: tilt axis angle, first and last tilt angles. -pyramid 40,-60,60,130,-55,60 Missing pyramid mask: 2 sets of tilt axis angle, first and last tilt angles. -cone 65 Missing cone mask: one tilt angle. -invert Invert mask just before writing the image.

Parameters:

-verbose 1Verbosity of output.
-datatype uForce writing of a new data type.
-sampling 1.5,1.5,1.5Sampling (A/pixel; a single value can be given).
-origin 110,50,44Origin for the mask (default from input image).
-wrapFlag to wrap around image boundaries (default not).

Bsoft version 1.5.7-20090605 (64 bit)

Generated by bdoc.pl on Mon Jun 15 11:47:11 2009

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